Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.87□□□□□ -0.35
Usb1Q91W78 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usb1Q91W78 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usb1Q91W78 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Usb1Q91W78 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usb1Q91W78 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Usb1Q91W78 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usb1Q91W78 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.87□□□□□ -0.35
Usb1Q91W78 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Usb1Q91W78 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Usb1Q91W78 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Usb1Q91W78 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.86□□□□□ -0.35
Usb1Q91W78 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.86□□□□□ -0.35
Usb1Q91W78 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Usb1Q91W78 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Gm6447-201ENSMUST00000118905 835 ntBASIC12.86□□□□□ -0.35
Usb1Q91W78 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.86□□□□□ -0.35
Usb1Q91W78 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.86□□□□□ -0.35
Usb1Q91W78 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Usb1Q91W78 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.86□□□□□ -0.35
Usb1Q91W78 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.86□□□□□ -0.35
Usb1Q91W78 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Usb1Q91W78 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.86□□□□□ -0.35
Usb1Q91W78 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.86□□□□□ -0.35
Usb1Q91W78 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Usb1Q91W78 Gm8652-201ENSMUST00000181363 964 ntBASIC12.86□□□□□ -0.35
Usb1Q91W78 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.86□□□□□ -0.35
Usb1Q91W78 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Usb1Q91W78 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.86□□□□□ -0.35
Usb1Q91W78 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Usb1Q91W78 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Usb1Q91W78 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.86□□□□□ -0.35
Usb1Q91W78 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Usb1Q91W78 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.85□□□□□ -0.35
Usb1Q91W78 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.85□□□□□ -0.35
Usb1Q91W78 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Usb1Q91W78 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Usb1Q91W78 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Usb1Q91W78 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.85□□□□□ -0.35
Usb1Q91W78 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Usb1Q91W78 Gm24196-201ENSMUST00000179161 110 ntBASIC12.85□□□□□ -0.35
Usb1Q91W78 Gm29649-201ENSMUST00000185649 419 ntBASIC12.85□□□□□ -0.35
Usb1Q91W78 Gm7561-201ENSMUST00000211203 886 ntBASIC12.85□□□□□ -0.35
Usb1Q91W78 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.85□□□□□ -0.35
Usb1Q91W78 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.85□□□□□ -0.35
Usb1Q91W78 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.85□□□□□ -0.35
Usb1Q91W78 Gm26315-201ENSMUST00000083890 321 ntBASIC12.85□□□□□ -0.35
Usb1Q91W78 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Usb1Q91W78 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.85□□□□□ -0.35
Usb1Q91W78 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.85□□□□□ -0.35
Usb1Q91W78 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Usb1Q91W78 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Usb1Q91W78 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms