Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.89□□□□□ -0.67
H1fooQ8VIK3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.88□□□□□ -0.67
H1fooQ8VIK3 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Gm13323-201ENSMUST00000120245 1151 ntBASIC10.88□□□□□ -0.67
H1fooQ8VIK3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.88□□□□□ -0.67
H1fooQ8VIK3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
H1fooQ8VIK3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Gm14350-201ENSMUST00000116642 640 ntBASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Gm16202-201ENSMUST00000117532 544 ntBASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Gm45668-201ENSMUST00000211271 493 ntBASIC10.87□□□□□ -0.67
H1fooQ8VIK3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
H1fooQ8VIK3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Gm5687-201ENSMUST00000118252 640 ntBASIC10.86□□□□□ -0.67
H1fooQ8VIK3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms