Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nkd2Q8VE28 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Gm42550-201ENSMUST00000201553 960 ntBASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Gm40466-201ENSMUST00000212174 422 ntBASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Gm5161-201ENSMUST00000075243 853 ntBASIC11.86□□□□□ -0.51
Nkd2Q8VE28 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.86□□□□□ -0.51
Nkd2Q8VE28 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nkd2Q8VE28 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Gm15198-201ENSMUST00000117283 177 ntBASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Mir497b-201ENSMUST00000093601 125 ntBASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkd2Q8VE28 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkd2Q8VE28 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkd2Q8VE28 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nkd2Q8VE28 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.84□□□□□ -0.51
Nkd2Q8VE28 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkd2Q8VE28 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nkd2Q8VE28 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkd2Q8VE28 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkd2Q8VE28 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkd2Q8VE28 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkd2Q8VE28 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms