Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm16202-201ENSMUST00000117532 544 ntBASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Gm15429-201ENSMUST00000151268 798 ntBASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.45□□□□□ -0.42
Lsm1Q8VC85 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm1Q8VC85 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Gm18624-201ENSMUST00000220966 658 ntBASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lsm1Q8VC85 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Gm37917-201ENSMUST00000194711 392 ntBASIC12.43□□□□□ -0.42
Lsm1Q8VC85 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.43□□□□□ -0.42
Lsm1Q8VC85 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm1Q8VC85 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm1Q8VC85 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms