Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim29Q8R2Q0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim29Q8R2Q0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim29Q8R2Q0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim29Q8R2Q0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Gm11618-201ENSMUST00000117946 267 ntBASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Gm9002-201ENSMUST00000178437 499 ntBASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim29Q8R2Q0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Gm8213-201ENSMUST00000118191 441 ntBASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Mir1894-201ENSMUST00000122802 81 ntBASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim29Q8R2Q0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Gm15806-201ENSMUST00000120696 955 ntBASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Gm27892-201ENSMUST00000185017 106 ntBASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim29Q8R2Q0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim29Q8R2Q0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms