Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Gm14921-201ENSMUST00000118643 908 ntBASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Gm8908-201ENSMUST00000121633 1024 ntBASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Gm25043-201ENSMUST00000158604 212 ntBASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Gm3096-201ENSMUST00000185770 364 ntBASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp7Q8R1T1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Gm14109-201ENSMUST00000118814 309 ntBASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Gm37201-201ENSMUST00000191845 523 ntBASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp7Q8R1T1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Gm11439-201ENSMUST00000118598 409 ntBASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Gm13570-201ENSMUST00000140763 309 ntBASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Gm27341-201ENSMUST00000183570 106 ntBASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Mir339-201ENSMUST00000083659 96 ntBASIC16.52■□□□□ 0.24
Chmp7Q8R1T1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Chmp7Q8R1T1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp7Q8R1T1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp7Q8R1T1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms