Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sf3a1Q8K4Z5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Gm13226-201ENSMUST00000117838 404 ntBASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Gm7029-201ENSMUST00000173226 450 ntBASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Gm27682-201ENSMUST00000183930 110 ntBASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Gm40466-201ENSMUST00000212174 422 ntBASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Gm25857-201ENSMUST00000082788 129 ntBASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sf3a1Q8K4Z5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Gm27731-201ENSMUST00000185192 107 ntBASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sf3a1Q8K4Z5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Gm14660-201ENSMUST00000119809 575 ntBASIC15.86■□□□□ 0.13
Sf3a1Q8K4Z5 Gm1335-201ENSMUST00000121653 386 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms