Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.25□□□□□ -0.45
Clrn1Q8K445 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Clrn1Q8K445 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.24□□□□□ -0.45
Clrn1Q8K445 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.24□□□□□ -0.45
Clrn1Q8K445 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.24□□□□□ -0.45
Clrn1Q8K445 Gm10156-201ENSMUST00000122364 462 ntBASIC12.24□□□□□ -0.45
Clrn1Q8K445 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.24□□□□□ -0.45
Clrn1Q8K445 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Clrn1Q8K445 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.24□□□□□ -0.45
Clrn1Q8K445 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.24□□□□□ -0.45
Clrn1Q8K445 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Clrn1Q8K445 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.23□□□□□ -0.45
Clrn1Q8K445 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Gm12203-201ENSMUST00000118235 598 ntBASIC12.23□□□□□ -0.45
Clrn1Q8K445 Gm12209-201ENSMUST00000120089 596 ntBASIC12.23□□□□□ -0.45
Clrn1Q8K445 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Gm37922-201ENSMUST00000195596 455 ntBASIC12.23□□□□□ -0.45
Clrn1Q8K445 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.23□□□□□ -0.45
Clrn1Q8K445 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.23□□□□□ -0.45
Clrn1Q8K445 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.23□□□□□ -0.45
Clrn1Q8K445 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Gm10012-201ENSMUST00000078252 192 ntBASIC12.23□□□□□ -0.45
Clrn1Q8K445 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.23□□□□□ -0.45
Clrn1Q8K445 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clrn1Q8K445 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Gm8805-201ENSMUST00000117848 313 ntBASIC12.22□□□□□ -0.45
Clrn1Q8K445 Gm13369-201ENSMUST00000119442 987 ntBASIC12.22□□□□□ -0.45
Clrn1Q8K445 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.22□□□□□ -0.45
Clrn1Q8K445 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms