Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgcs1Q8JZK9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgcs1Q8JZK9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hmgcs1Q8JZK9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Gm12859-201ENSMUST00000117834 427 ntBASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Mir6392-201ENSMUST00000184924 108 ntBASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Itm2b-204ENSMUST00000228637 783 ntBASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmgcs1Q8JZK9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.37□□□□□ -0.43
Hmgcs1Q8JZK9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Gm11978-201ENSMUST00000122315 466 ntBASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgcs1Q8JZK9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms