Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Gm16202-201ENSMUST00000117532 544 ntBASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Gm27847-201ENSMUST00000183711 107 ntBASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Gm27375-201ENSMUST00000183799 107 ntBASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rfwd3Q8CIK8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Gm11978-201ENSMUST00000122315 466 ntBASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Gm8810-201ENSMUST00000172895 754 ntBASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Gm25927-201ENSMUST00000175058 117 ntBASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Gm18187-201ENSMUST00000196476 984 ntBASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Rfwd3Q8CIK8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rfwd3Q8CIK8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Rfwd3Q8CIK8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rfwd3Q8CIK8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfwd3Q8CIK8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rfwd3Q8CIK8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rfwd3Q8CIK8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rfwd3Q8CIK8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Gm11618-201ENSMUST00000117946 267 ntBASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.2□□□□□ -0.46
Rfwd3Q8CIK8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms