Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox30Q8CGW4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox30Q8CGW4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sox30Q8CGW4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.15□□□□□ -0.15
Sox30Q8CGW4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.14□□□□□ -0.15
Sox30Q8CGW4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox30Q8CGW4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox30Q8CGW4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms