Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Gm18187-201ENSMUST00000196476 984 ntBASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Brf1Q8CFK2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Gm14704-201ENSMUST00000120300 874 ntBASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Gm11637-201ENSMUST00000120601 592 ntBASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Brf1Q8CFK2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Gm12363-201ENSMUST00000122250 668 ntBASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Gm17208-201ENSMUST00000168388 535 ntBASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Gm27682-201ENSMUST00000183930 110 ntBASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Gm37042-201ENSMUST00000193816 581 ntBASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Brf1Q8CFK2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Gm13829-201ENSMUST00000119600 138 ntBASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Gm40466-201ENSMUST00000212174 422 ntBASIC15.62■□□□□ 0.09
Brf1Q8CFK2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms