Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
E4f1Q8CCE9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Mir686-201ENSMUST00000102174 109 ntBASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gm7783-201ENSMUST00000204795 781 ntBASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gm10146-201ENSMUST00000072739 309 ntBASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.26■□□□□ 0.03
E4f1Q8CCE9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Gm25261-201ENSMUST00000157416 134 ntBASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Gm25927-201ENSMUST00000175058 117 ntBASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Gm43133-201ENSMUST00000197472 463 ntBASIC15.25■□□□□ 0.03
E4f1Q8CCE9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
E4f1Q8CCE9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Gm11618-201ENSMUST00000117946 267 ntBASIC15.24■□□□□ 0.03
E4f1Q8CCE9 Gm13342-201ENSMUST00000121055 207 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms