Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Gm2231-201ENSMUST00000125661 612 ntBASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Gm7063-201ENSMUST00000186840 981 ntBASIC14.3□□□□□ -0.12
Trim9Q8C7M3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim9Q8C7M3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Gm24644-201ENSMUST00000157114 139 ntBASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Gm29705-201ENSMUST00000212598 474 ntBASIC14.29□□□□□ -0.12
Trim9Q8C7M3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Gm10146-201ENSMUST00000072739 309 ntBASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Gm6091-201ENSMUST00000098307 165 ntBASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim9Q8C7M3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gm11478-201ENSMUST00000117851 599 ntBASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gm14704-201ENSMUST00000120300 874 ntBASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gm4271-201ENSMUST00000174444 973 ntBASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gm22121-201ENSMUST00000175148 54 ntBASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gm27847-201ENSMUST00000183711 107 ntBASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gm27375-201ENSMUST00000183799 107 ntBASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gm37042-201ENSMUST00000193816 581 ntBASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.28□□□□□ -0.12
Trim9Q8C7M3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim9Q8C7M3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms