Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Gm14704-201ENSMUST00000120300 874 ntBASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Mir1982-201ENSMUST00000157368 74 ntBASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Gm26927-201ENSMUST00000182385 965 ntBASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc60Q8C4J0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Gm44094-201ENSMUST00000204703 2030 ntBASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Gm38157-201ENSMUST00000194178 1698 ntBASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Gm19163-201ENSMUST00000223313 780 ntBASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 n-R5s77-201ENSMUST00000083757 119 ntBASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.53■□□□□ 0.24
Ccdc60Q8C4J0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc60Q8C4J0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc60Q8C4J0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc60Q8C4J0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Ccdc60Q8C4J0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc60Q8C4J0 Gm12384-201ENSMUST00000119228 919 ntBASIC16.52■□□□□ 0.24
Ccdc60Q8C4J0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.52■□□□□ 0.24
Ccdc60Q8C4J0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc60Q8C4J0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc60Q8C4J0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc60Q8C4J0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc60Q8C4J0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc60Q8C4J0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc60Q8C4J0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc60Q8C4J0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc60Q8C4J0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Ccdc60Q8C4J0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc60Q8C4J0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc60Q8C4J0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc60Q8C4J0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Gm7002-201ENSMUST00000221386 2165 ntBASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Snord83b-201ENSMUST00000104546 94 ntBASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Gm14127-201ENSMUST00000117906 678 ntBASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Gm22121-201ENSMUST00000175148 54 ntBASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc60Q8C4J0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms