Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sh3rf3Q8C120 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Rubie-203ENSMUST00000227803 2430 ntBASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sh3rf3Q8C120 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Gm27892-201ENSMUST00000185017 106 ntBASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sh3rf3Q8C120 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Gm5035-201ENSMUST00000215581 927 ntBASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sh3rf3Q8C120 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Gm8805-201ENSMUST00000117848 313 ntBASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Gm15806-201ENSMUST00000120696 955 ntBASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Gm11424-201ENSMUST00000121929 829 ntBASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Gm13123-201ENSMUST00000122173 492 ntBASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Mir1894-201ENSMUST00000122802 81 ntBASIC13.5□□□□□ -0.25
Sh3rf3Q8C120 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms