Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.75□□□□□ -0.21
Trerf1Q8BXJ2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Gm42550-201ENSMUST00000201553 960 ntBASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trerf1Q8BXJ2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Gm15806-201ENSMUST00000120696 955 ntBASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Gm29608-201ENSMUST00000190444 463 ntBASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trerf1Q8BXJ2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trerf1Q8BXJ2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms