Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Usp40Q8BWR4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp40Q8BWR4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Usp40Q8BWR4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Usp40Q8BWR4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Gm8018-201ENSMUST00000173536 789 ntBASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC17.72■□□□□ 0.43
Usp40Q8BWR4 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.72■□□□□ 0.43
Usp40Q8BWR4 AC126253.1-202ENSMUST00000226732 835 ntBASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Usp40Q8BWR4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 AC113441.2-201ENSMUST00000221538 1468 ntBASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Gm13813-201ENSMUST00000120998 787 ntBASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Gm13570-201ENSMUST00000140763 309 ntBASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Gm15276-201ENSMUST00000145953 498 ntBASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Mir7070-201ENSMUST00000183657 86 ntBASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Usp40Q8BWR4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Usp40Q8BWR4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Gm43823-201ENSMUST00000197391 1808 ntBASIC17.7■□□□□ 0.42
Usp40Q8BWR4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp40Q8BWR4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Usp40Q8BWR4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms