Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Gm13350-201ENSMUST00000120519 479 ntBASIC12.43□□□□□ -0.42
SynbQ8BI41 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 Gm7783-201ENSMUST00000204795 781 ntBASIC12.43□□□□□ -0.42
SynbQ8BI41 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.43□□□□□ -0.42
SynbQ8BI41 Gm45930-201ENSMUST00000221330 292 ntBASIC12.43□□□□□ -0.42
SynbQ8BI41 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 Gm10268-201ENSMUST00000085340 555 ntBASIC12.43□□□□□ -0.42
SynbQ8BI41 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SynbQ8BI41 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.43□□□□□ -0.42
SynbQ8BI41 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SynbQ8BI41 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SynbQ8BI41 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SynbQ8BI41 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SynbQ8BI41 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.42□□□□□ -0.42
SynbQ8BI41 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SynbQ8BI41 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.42□□□□□ -0.42
SynbQ8BI41 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.42□□□□□ -0.42
SynbQ8BI41 Gm13342-201ENSMUST00000121055 207 ntBASIC12.42□□□□□ -0.42
SynbQ8BI41 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SynbQ8BI41 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.42□□□□□ -0.42
SynbQ8BI41 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.42□□□□□ -0.42
SynbQ8BI41 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
SynbQ8BI41 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Gm37922-201ENSMUST00000195596 455 ntBASIC12.42□□□□□ -0.42
SynbQ8BI41 Gm37497-201ENSMUST00000195830 798 ntBASIC12.42□□□□□ -0.42
SynbQ8BI41 Gm44364-201ENSMUST00000198368 141 ntBASIC12.42□□□□□ -0.42
SynbQ8BI41 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.42□□□□□ -0.42
SynbQ8BI41 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.42□□□□□ -0.42
SynbQ8BI41 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.42□□□□□ -0.42
SynbQ8BI41 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.42□□□□□ -0.42
SynbQ8BI41 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.42□□□□□ -0.42
SynbQ8BI41 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.42□□□□□ -0.42
SynbQ8BI41 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SynbQ8BI41 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.42□□□□□ -0.42
SynbQ8BI41 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SynbQ8BI41 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.42□□□□□ -0.42
SynbQ8BI41 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SynbQ8BI41 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynbQ8BI41 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
SynbQ8BI41 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SynbQ8BI41 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SynbQ8BI41 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.41□□□□□ -0.42
SynbQ8BI41 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.41□□□□□ -0.42
SynbQ8BI41 Gm7584-201ENSMUST00000175829 940 ntBASIC12.41□□□□□ -0.42
SynbQ8BI41 Gm27516-201ENSMUST00000184237 98 ntBASIC12.41□□□□□ -0.42
SynbQ8BI41 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.41□□□□□ -0.42
SynbQ8BI41 Gm29608-201ENSMUST00000190444 463 ntBASIC12.41□□□□□ -0.42
SynbQ8BI41 Gm38241-201ENSMUST00000192641 898 ntBASIC12.41□□□□□ -0.42
SynbQ8BI41 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Gm43133-201ENSMUST00000197472 463 ntBASIC12.41□□□□□ -0.42
SynbQ8BI41 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.41□□□□□ -0.42
SynbQ8BI41 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.41□□□□□ -0.42
SynbQ8BI41 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SynbQ8BI41 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SynbQ8BI41 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.41□□□□□ -0.42
SynbQ8BI41 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynbQ8BI41 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SynbQ8BI41 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SynbQ8BI41 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms