Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Atg4bQ8BGE6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Gm8602-201ENSMUST00000184045 607 ntBASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Gm29649-201ENSMUST00000185649 419 ntBASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Gm29705-201ENSMUST00000212598 474 ntBASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Atg4bQ8BGE6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Gm10146-201ENSMUST00000072739 309 ntBASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Atg4bQ8BGE6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Gm16479-201ENSMUST00000121706 932 ntBASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Gm17150-201ENSMUST00000165577 381 ntBASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.21□□□□□ -0.45
Atg4bQ8BGE6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms