Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim50Q810I2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.65□□□□□ -0.38
Trim50Q810I2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim50Q810I2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.65□□□□□ -0.38
Trim50Q810I2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim50Q810I2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Trim50Q810I2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim50Q810I2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trim50Q810I2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trim50Q810I2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.39
Trim50Q810I2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim50Q810I2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim50Q810I2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.64□□□□□ -0.39
Trim50Q810I2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim50Q810I2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim50Q810I2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trim50Q810I2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.64□□□□□ -0.39
Trim50Q810I2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim50Q810I2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim50Q810I2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim50Q810I2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trim50Q810I2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Gm27839-201ENSMUST00000184242 106 ntBASIC12.64□□□□□ -0.39
Trim50Q810I2 Gm27486-201ENSMUST00000184923 80 ntBASIC12.64□□□□□ -0.39
Trim50Q810I2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim50Q810I2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim50Q810I2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim50Q810I2 Gm6458-201ENSMUST00000211573 635 ntBASIC12.64□□□□□ -0.39
Trim50Q810I2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Trim50Q810I2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim50Q810I2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim50Q810I2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim50Q810I2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim50Q810I2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim50Q810I2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim50Q810I2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim50Q810I2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim50Q810I2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim50Q810I2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim50Q810I2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim50Q810I2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim50Q810I2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim50Q810I2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim50Q810I2 Gm12203-201ENSMUST00000118235 598 ntBASIC12.63□□□□□ -0.39
Trim50Q810I2 Gm12209-201ENSMUST00000120089 596 ntBASIC12.63□□□□□ -0.39
Trim50Q810I2 Gm13123-201ENSMUST00000122173 492 ntBASIC12.63□□□□□ -0.39
Trim50Q810I2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim50Q810I2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim50Q810I2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim50Q810I2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms