Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.55□□□□□ -0.4
Trim36Q80WG7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.55□□□□□ -0.4
Trim36Q80WG7 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.55□□□□□ -0.4
Trim36Q80WG7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.55□□□□□ -0.4
Trim36Q80WG7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim36Q80WG7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.55□□□□□ -0.4
Trim36Q80WG7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim36Q80WG7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.54□□□□□ -0.4
Trim36Q80WG7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.54□□□□□ -0.4
Trim36Q80WG7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Mir7221-201ENSMUST00000184009 72 ntBASIC12.54□□□□□ -0.4
Trim36Q80WG7 Gm27701-201ENSMUST00000184498 110 ntBASIC12.54□□□□□ -0.4
Trim36Q80WG7 Mir7654-201ENSMUST00000185082 70 ntBASIC12.54□□□□□ -0.4
Trim36Q80WG7 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.54□□□□□ -0.4
Trim36Q80WG7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.54□□□□□ -0.4
Trim36Q80WG7 Gm18905-201ENSMUST00000205454 928 ntBASIC12.54□□□□□ -0.4
Trim36Q80WG7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.54□□□□□ -0.4
Trim36Q80WG7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.54□□□□□ -0.4
Trim36Q80WG7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim36Q80WG7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim36Q80WG7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim36Q80WG7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim36Q80WG7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim36Q80WG7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trim36Q80WG7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim36Q80WG7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim36Q80WG7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Trim36Q80WG7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim36Q80WG7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim36Q80WG7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim36Q80WG7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim36Q80WG7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim36Q80WG7 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms