Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm11591-201ENSMUST00000120063 702 ntBASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Gm29396-201ENSMUST00000185659 716 ntBASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh19Q80TF3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Gm7809-201ENSMUST00000153199 742 ntBASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Gm6222-202ENSMUST00000182143 629 ntBASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Gm27501-201ENSMUST00000183599 107 ntBASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Gm44364-201ENSMUST00000198368 141 ntBASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Gm43822-201ENSMUST00000200285 476 ntBASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh19Q80TF3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Gm12241-201ENSMUST00000118330 726 ntBASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Olfr284-202ENSMUST00000206647 966 ntBASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Gm9368-201ENSMUST00000219348 831 ntBASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh19Q80TF3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms