Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Gm6458-201ENSMUST00000211573 635 ntBASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Timd4Q6U7R4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Gm13226-201ENSMUST00000117838 404 ntBASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Mir1982-201ENSMUST00000157368 74 ntBASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Gm43630-201ENSMUST00000201550 776 ntBASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Timd4Q6U7R4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Gm14660-201ENSMUST00000119809 575 ntBASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Mir1938-201ENSMUST00000158746 100 ntBASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.06□□□□□ -0.48
Timd4Q6U7R4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms