Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.8□□□□□ -0.36
Scaf4Q6PFF0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Gm21854-201ENSMUST00000179901 471 ntBASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Gm43514-201ENSMUST00000198852 424 ntBASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Gm26315-201ENSMUST00000083890 321 ntBASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scaf4Q6PFF0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Daam2-202ENSMUST00000224595 1926 ntBASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scaf4Q6PFF0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms