Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf220Q6PDX6 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Gm5566-201ENSMUST00000116118 459 ntBASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Gm44719-201ENSMUST00000206404 149 ntBASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Gm18027-201ENSMUST00000218947 619 ntBASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf220Q6PDX6 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Gm18766-201ENSMUST00000189811 808 ntBASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Gm29741-201ENSMUST00000192667 421 ntBASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Gm43125-201ENSMUST00000201724 730 ntBASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Gm6443-201ENSMUST00000203599 874 ntBASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf220Q6PDX6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms