Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.16■□□□□ 0.02
Smarcc2Q6PDG5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Gm8213-201ENSMUST00000118191 441 ntBASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcc2Q6PDG5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
Smarcc2Q6PDG5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Mir686-201ENSMUST00000102174 109 ntBASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Gm10156-201ENSMUST00000122364 462 ntBASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Gm16372-201ENSMUST00000073088 450 ntBASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.14■□□□□ 0.01
Smarcc2Q6PDG5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc2Q6PDG5 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcc2Q6PDG5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms