Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Gm5863-201ENSMUST00000121760 1008 ntBASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Gm22138-201ENSMUST00000158748 128 ntBASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Gm8199-201ENSMUST00000121323 823 ntBASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Slx4Q6P1D7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Gm9387-201ENSMUST00000098624 1320 ntBASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC19.59■□□□□ 0.73
Slx4Q6P1D7 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slx4Q6P1D7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Gm11989-201ENSMUST00000117240 672 ntBASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Gm11362-201ENSMUST00000118838 850 ntBASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Gm12899-201ENSMUST00000120565 551 ntBASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Gm25881-201ENSMUST00000157783 103 ntBASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Slx4Q6P1D7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Gm44291-201ENSMUST00000203102 2865 ntBASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slx4Q6P1D7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Gm37246-201ENSMUST00000192665 835 ntBASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slx4Q6P1D7 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms