Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scube3Q66PY1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scube3Q66PY1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scube3Q66PY1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scube3Q66PY1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.73□□□□□ -0.21
Scube3Q66PY1 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scube3Q66PY1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scube3Q66PY1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.73□□□□□ -0.21
Scube3Q66PY1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scube3Q66PY1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.72□□□□□ -0.21
Scube3Q66PY1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.72□□□□□ -0.21
Scube3Q66PY1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Gm7029-201ENSMUST00000173226 450 ntBASIC13.72□□□□□ -0.21
Scube3Q66PY1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.72□□□□□ -0.21
Scube3Q66PY1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Gm10268-201ENSMUST00000085340 555 ntBASIC13.72□□□□□ -0.21
Scube3Q66PY1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scube3Q66PY1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.71□□□□□ -0.21
Scube3Q66PY1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.71□□□□□ -0.21
Scube3Q66PY1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Gm5970-201ENSMUST00000131638 1216 ntBASIC13.71□□□□□ -0.21
Scube3Q66PY1 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.71□□□□□ -0.21
Scube3Q66PY1 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.71□□□□□ -0.21
Scube3Q66PY1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scube3Q66PY1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scube3Q66PY1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
Scube3Q66PY1 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Scube3Q66PY1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.71□□□□□ -0.22
Scube3Q66PY1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scube3Q66PY1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scube3Q66PY1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scube3Q66PY1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.7□□□□□ -0.22
Scube3Q66PY1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Scube3Q66PY1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.7□□□□□ -0.22
Scube3Q66PY1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scube3Q66PY1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms