Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ecm1Q61508 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ecm1Q61508 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.29□□□□□ -0.12
Ecm1Q61508 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ecm1Q61508 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ecm1Q61508 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ecm1Q61508 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ecm1Q61508 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ecm1Q61508 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.29□□□□□ -0.12
Ecm1Q61508 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.29□□□□□ -0.12
Ecm1Q61508 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ecm1Q61508 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.29□□□□□ -0.12
Ecm1Q61508 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ecm1Q61508 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ecm1Q61508 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ecm1Q61508 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Gm5070-201ENSMUST00000177599 862 ntBASIC14.28□□□□□ -0.12
Ecm1Q61508 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.28□□□□□ -0.12
Ecm1Q61508 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ecm1Q61508 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ecm1Q61508 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ecm1Q61508 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ecm1Q61508 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ecm1Q61508 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
Ecm1Q61508 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ecm1Q61508 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ecm1Q61508 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.27□□□□□ -0.12
Ecm1Q61508 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ecm1Q61508 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ecm1Q61508 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ecm1Q61508 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.27□□□□□ -0.13
Ecm1Q61508 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.27□□□□□ -0.13
Ecm1Q61508 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ecm1Q61508 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ecm1Q61508 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ecm1Q61508 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ecm1Q61508 Gm28882-201ENSMUST00000185504 314 ntBASIC14.27□□□□□ -0.13
Ecm1Q61508 Gm7003-201ENSMUST00000195089 312 ntBASIC14.27□□□□□ -0.13
Ecm1Q61508 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.27□□□□□ -0.13
Ecm1Q61508 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.27□□□□□ -0.13
Ecm1Q61508 Gm45433-201ENSMUST00000209386 247 ntBASIC14.27□□□□□ -0.13
Ecm1Q61508 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Ecm1Q61508 Gm39404-201ENSMUST00000216350 313 ntBASIC14.27□□□□□ -0.13
Ecm1Q61508 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ecm1Q61508 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ecm1Q61508 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.27□□□□□ -0.13
Ecm1Q61508 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ecm1Q61508 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ecm1Q61508 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ecm1Q61508 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ecm1Q61508 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ecm1Q61508 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.26□□□□□ -0.13
Ecm1Q61508 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.26□□□□□ -0.13
Ecm1Q61508 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.26□□□□□ -0.13
Ecm1Q61508 Gm13813-201ENSMUST00000120998 787 ntBASIC14.26□□□□□ -0.13
Ecm1Q61508 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ecm1Q61508 Gm24749-201ENSMUST00000157838 343 ntBASIC14.26□□□□□ -0.13
Ecm1Q61508 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.26□□□□□ -0.13
Ecm1Q61508 Gm43378-201ENSMUST00000199336 582 ntBASIC14.26□□□□□ -0.13
Ecm1Q61508 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.26□□□□□ -0.13
Ecm1Q61508 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ecm1Q61508 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms