Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.21□□□□□ -0.13
Col11a1Q61245 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.21□□□□□ -0.13
Col11a1Q61245 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col11a1Q61245 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col11a1Q61245 Gm3793-201ENSMUST00000204973 672 ntBASIC14.21□□□□□ -0.13
Col11a1Q61245 Gm45120-201ENSMUST00000208880 408 ntBASIC14.21□□□□□ -0.13
Col11a1Q61245 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.21□□□□□ -0.13
Col11a1Q61245 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.21□□□□□ -0.13
Col11a1Q61245 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col11a1Q61245 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Col11a1Q61245 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col11a1Q61245 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col11a1Q61245 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col11a1Q61245 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col11a1Q61245 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
Col11a1Q61245 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col11a1Q61245 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.21□□□□□ -0.14
Col11a1Q61245 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col11a1Q61245 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.2□□□□□ -0.14
Col11a1Q61245 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.2□□□□□ -0.14
Col11a1Q61245 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14.2□□□□□ -0.14
Col11a1Q61245 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col11a1Q61245 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.2□□□□□ -0.14
Col11a1Q61245 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col11a1Q61245 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col11a1Q61245 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.2□□□□□ -0.14
Col11a1Q61245 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Col11a1Q61245 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col11a1Q61245 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.2□□□□□ -0.14
Col11a1Q61245 Gm13937-201ENSMUST00000121000 988 ntBASIC14.2□□□□□ -0.14
Col11a1Q61245 Gm4726-201ENSMUST00000135604 736 ntBASIC14.2□□□□□ -0.14
Col11a1Q61245 Gm6019-201ENSMUST00000148369 736 ntBASIC14.2□□□□□ -0.14
Col11a1Q61245 Gm25072-201ENSMUST00000175233 235 ntBASIC14.2□□□□□ -0.14
Col11a1Q61245 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.2□□□□□ -0.14
Col11a1Q61245 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.2□□□□□ -0.14
Col11a1Q61245 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.2□□□□□ -0.14
Col11a1Q61245 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col11a1Q61245 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Col11a1Q61245 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.19□□□□□ -0.14
Col11a1Q61245 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.19□□□□□ -0.14
Col11a1Q61245 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.19□□□□□ -0.14
Col11a1Q61245 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.19□□□□□ -0.14
Col11a1Q61245 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col11a1Q61245 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Col11a1Q61245 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col11a1Q61245 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col11a1Q61245 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col11a1Q61245 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.19□□□□□ -0.14
Col11a1Q61245 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.18□□□□□ -0.14
Col11a1Q61245 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.18□□□□□ -0.14
Col11a1Q61245 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.18□□□□□ -0.14
Col11a1Q61245 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.18□□□□□ -0.14
Col11a1Q61245 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Col11a1Q61245 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.18□□□□□ -0.14
Col11a1Q61245 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col11a1Q61245 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col11a1Q61245 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms