Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.48□□□□□ -0.41
Col12a1Q60847 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm12314-201ENSMUST00000118104 538 ntBASIC12.48□□□□□ -0.41
Col12a1Q60847 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm15744-201ENSMUST00000161734 213 ntBASIC12.48□□□□□ -0.41
Col12a1Q60847 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm6905-201ENSMUST00000205729 511 ntBASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm45856-201ENSMUST00000212752 416 ntBASIC12.48□□□□□ -0.41
Col12a1Q60847 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.47□□□□□ -0.41
Col12a1Q60847 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Col12a1Q60847 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col12a1Q60847 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.47□□□□□ -0.41
Col12a1Q60847 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.47□□□□□ -0.41
Col12a1Q60847 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.47□□□□□ -0.41
Col12a1Q60847 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.47□□□□□ -0.41
Col12a1Q60847 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col12a1Q60847 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Gm13315-201ENSMUST00000120376 991 ntBASIC12.47□□□□□ -0.41
Col12a1Q60847 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.47□□□□□ -0.41
Col12a1Q60847 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.47□□□□□ -0.41
Col12a1Q60847 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.47□□□□□ -0.41
Col12a1Q60847 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col12a1Q60847 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.46□□□□□ -0.41
Col12a1Q60847 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col12a1Q60847 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col12a1Q60847 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.46□□□□□ -0.41
Col12a1Q60847 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Gm14724-201ENSMUST00000118400 537 ntBASIC12.46□□□□□ -0.41
Col12a1Q60847 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.46□□□□□ -0.41
Col12a1Q60847 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.46□□□□□ -0.41
Col12a1Q60847 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col12a1Q60847 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Col12a1Q60847 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.46□□□□□ -0.42
Col12a1Q60847 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Col12a1Q60847 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.46□□□□□ -0.42
Col12a1Q60847 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Col12a1Q60847 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.46□□□□□ -0.42
Col12a1Q60847 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.46□□□□□ -0.42
Col12a1Q60847 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Col12a1Q60847 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col12a1Q60847 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.45□□□□□ -0.42
Col12a1Q60847 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col12a1Q60847 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms