Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.39□□□□□ -0.43
Nr1h4Q60641 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.39□□□□□ -0.43
Nr1h4Q60641 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nr1h4Q60641 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.38□□□□□ -0.43
Nr1h4Q60641 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Gm43094-201ENSMUST00000196549 921 ntBASIC12.38□□□□□ -0.43
Nr1h4Q60641 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.38□□□□□ -0.43
Nr1h4Q60641 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.38□□□□□ -0.43
Nr1h4Q60641 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nr1h4Q60641 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Gm27702-201ENSMUST00000184512 56 ntBASIC12.37□□□□□ -0.43
Nr1h4Q60641 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.37□□□□□ -0.43
Nr1h4Q60641 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.37□□□□□ -0.43
Nr1h4Q60641 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.37□□□□□ -0.43
Nr1h4Q60641 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nr1h4Q60641 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms