Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm43133-201ENSMUST00000197472 463 ntBASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.56■□□□□ 0.08
Vps54Q5SPW0 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.56■□□□□ 0.08
Vps54Q5SPW0 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.56■□□□□ 0.08
Vps54Q5SPW0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vps54Q5SPW0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Gm12291-201ENSMUST00000121627 311 ntBASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vps54Q5SPW0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Gm16379-201ENSMUST00000161469 348 ntBASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Gm8762-201ENSMUST00000193486 339 ntBASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Gm43118-201ENSMUST00000199149 775 ntBASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps54Q5SPW0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps54Q5SPW0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms