Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf20Q5DTM8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf20Q5DTM8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf20Q5DTM8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf20Q5DTM8 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rnf20Q5DTM8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Rnf20Q5DTM8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf20Q5DTM8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf20Q5DTM8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf20Q5DTM8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf20Q5DTM8 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.45■□□□□ 0.06
Rnf20Q5DTM8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf20Q5DTM8 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Gm12490-201ENSMUST00000120255 560 ntBASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Gm12138-201ENSMUST00000122180 951 ntBASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Gm27892-201ENSMUST00000185017 106 ntBASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Gm37922-201ENSMUST00000195596 455 ntBASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf20Q5DTM8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf20Q5DTM8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms