Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Snora78-201ENSMUST00000158630 128 ntBASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Gm25927-201ENSMUST00000175058 117 ntBASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 AY702102-202ENSMUST00000194651 1173 ntBASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Snora73a-201ENSMUST00000082453 205 ntBASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.97□□□□□ -0.17
R3hdm4Q4VBF2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Gm12957-201ENSMUST00000117835 377 ntBASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
R3hdm4Q4VBF2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
R3hdm4Q4VBF2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
R3hdm4Q4VBF2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
R3hdm4Q4VBF2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Gm22018-201ENSMUST00000104357 131 ntBASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Gm11591-201ENSMUST00000120063 702 ntBASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Gm37424-201ENSMUST00000191727 561 ntBASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
R3hdm4Q4VBF2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms