Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf38aQ4FK66 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Gm22323-201ENSMUST00000103832 109 ntBASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Gm24255-201ENSMUST00000104481 128 ntBASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Gm38092-201ENSMUST00000195600 653 ntBASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Prpf38aQ4FK66 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Gm21769-201ENSMUST00000211922 111 ntBASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Gm24526-201ENSMUST00000082921 158 ntBASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.13■□□□□ 0.01
Prpf38aQ4FK66 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Gm37259-201ENSMUST00000193903 849 ntBASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Gm5904-201ENSMUST00000210286 865 ntBASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38aQ4FK66 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms