Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.56■□□□□ 0.24
Ccdc27Q3V036 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.56■□□□□ 0.24
Ccdc27Q3V036 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc27Q3V036 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc27Q3V036 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc27Q3V036 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc27Q3V036 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc27Q3V036 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc27Q3V036 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.56■□□□□ 0.24
Ccdc27Q3V036 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc27Q3V036 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc27Q3V036 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ccdc27Q3V036 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ccdc27Q3V036 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Gm22189-201ENSMUST00000103822 86 ntBASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Gm11524-201ENSMUST00000119349 807 ntBASIC16.54■□□□□ 0.24
Ccdc27Q3V036 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Gm26464-201ENSMUST00000157094 305 ntBASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.54■□□□□ 0.24
Ccdc27Q3V036 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ccdc27Q3V036 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Mir874-201ENSMUST00000104769 76 ntBASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.53■□□□□ 0.24
Ccdc27Q3V036 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms