Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Snora78-201ENSMUST00000158630 128 ntBASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Gm22121-201ENSMUST00000175148 54 ntBASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Gm27514-201ENSMUST00000183692 110 ntBASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 AY702102-202ENSMUST00000194651 1173 ntBASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.68□□□□□ -0.22
Nlrc4Q3UP24 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Gm14704-201ENSMUST00000120300 874 ntBASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Gm4768-201ENSMUST00000206199 686 ntBASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Snora73a-201ENSMUST00000082453 205 ntBASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nlrc4Q3UP24 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Gm6222-202ENSMUST00000182143 629 ntBASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nlrc4Q3UP24 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nlrc4Q3UP24 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nlrc4Q3UP24 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nlrc4Q3UP24 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nlrc4Q3UP24 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nlrc4Q3UP24 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nlrc4Q3UP24 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nlrc4Q3UP24 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nlrc4Q3UP24 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nlrc4Q3UP24 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms