Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Gm23984-201ENSMUST00000157139 203 ntBASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Gm38671-201ENSMUST00000200573 130 ntBASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.23□□□□□ -0.45
Brf2Q3UAW9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Brf2Q3UAW9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Gm6180-201ENSMUST00000065243 498 ntBASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Brf2Q3UAW9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Gm11918-201ENSMUST00000121660 179 ntBASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.21□□□□□ -0.45
Brf2Q3UAW9 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Brf2Q3UAW9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms