Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Gm16202-201ENSMUST00000117532 544 ntBASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Gm12291-201ENSMUST00000121627 311 ntBASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Gm44124-201ENSMUST00000204159 472 ntBASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cul4aQ3TCH7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cul4aQ3TCH7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cul4aQ3TCH7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms