Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Treml4Q3LRV9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.23□□□□□ -0.45
Treml4Q3LRV9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Treml4Q3LRV9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Treml4Q3LRV9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Treml4Q3LRV9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Treml4Q3LRV9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Treml4Q3LRV9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Treml4Q3LRV9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Treml4Q3LRV9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Treml4Q3LRV9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Treml4Q3LRV9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Gm10434-201ENSMUST00000101158 471 ntBASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Gm7809-201ENSMUST00000153199 742 ntBASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.22□□□□□ -0.45
Treml4Q3LRV9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Morn2-202ENSMUST00000227729 656 ntBASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Treml4Q3LRV9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Gm18584-201ENSMUST00000203098 964 ntBASIC12.21□□□□□ -0.45
Treml4Q3LRV9 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Treml4Q3LRV9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Treml4Q3LRV9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.21□□□□□ -0.46
Treml4Q3LRV9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Treml4Q3LRV9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Treml4Q3LRV9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Treml4Q3LRV9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Treml4Q3LRV9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Treml4Q3LRV9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Treml4Q3LRV9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms