Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Q3KNL4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.75□□□□□ -0.37
Q3KNL4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Gm22189-201ENSMUST00000103822 86 ntBASIC12.75□□□□□ -0.37
Q3KNL4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Gm15371-201ENSMUST00000117057 784 ntBASIC12.75□□□□□ -0.37
Q3KNL4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Q3KNL4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Q3KNL4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Q3KNL4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.75□□□□□ -0.37
Q3KNL4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.75□□□□□ -0.37
Q3KNL4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.75□□□□□ -0.37
Q3KNL4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Q3KNL4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.75□□□□□ -0.37
Q3KNL4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Q3KNL4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Q3KNL4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Q3KNL4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.74□□□□□ -0.37
Q3KNL4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.74□□□□□ -0.37
Q3KNL4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.74□□□□□ -0.37
Q3KNL4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Q3KNL4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.74□□□□□ -0.37
Q3KNL4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Q3KNL4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.74□□□□□ -0.37
Q3KNL4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.74□□□□□ -0.37
Q3KNL4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.74□□□□□ -0.37
Q3KNL4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.74□□□□□ -0.37
Q3KNL4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.74□□□□□ -0.37
Q3KNL4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.74□□□□□ -0.37
Q3KNL4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.74□□□□□ -0.37
Q3KNL4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.74□□□□□ -0.37
Q3KNL4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Q3KNL4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Q3KNL4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Q3KNL4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Q3KNL4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.74□□□□□ -0.37
Q3KNL4 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.73□□□□□ -0.37
Q3KNL4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.73□□□□□ -0.37
Q3KNL4 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Q3KNL4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Q3KNL4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Q3KNL4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Gm6447-201ENSMUST00000118905 835 ntBASIC12.73□□□□□ -0.37
Q3KNL4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.73□□□□□ -0.37
Q3KNL4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Q3KNL4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.73□□□□□ -0.37
Q3KNL4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.73□□□□□ -0.37
Q3KNL4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.73□□□□□ -0.37
Q3KNL4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.73□□□□□ -0.37
Q3KNL4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.73□□□□□ -0.37
Q3KNL4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Q3KNL4 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms