Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm32102-201ENSMUST00000196885 241 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm9797-202ENSMUST00000218003 294 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 CT571245.2-201ENSMUST00000218421 305 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm10263-201ENSMUST00000085163 300 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm23595-201ENSMUST00000104306 130 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm13094-201ENSMUST00000117930 409 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm5714-201ENSMUST00000197343 566 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Gm4900-201ENSMUST00000222046 1628 ntBASIC6.65□□□□□ -1.35
Ush2AQ2QI47 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 H2afy3-201ENSMUST00000151919 1112 ntBASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Gm5205-201ENSMUST00000182253 1003 ntBASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Gm8226-201ENSMUST00000190511 798 ntBASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Gm37207-201ENSMUST00000194284 296 ntBASIC6.65□□□□□ -1.35
Ush2AQ2QI47 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 AC154477.1-201ENSMUST00000226515 773 ntBASIC6.65□□□□□ -1.35
Ush2AQ2QI47 AC137842.2-201ENSMUST00000227734 797 ntBASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Gm4978-201ENSMUST00000071565 801 ntBASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Gm5855-201ENSMUST00000200240 1305 ntBASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ush2AQ2QI47 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 CT009550.1-201ENSMUST00000225750 864 ntBASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gm23582-201ENSMUST00000158530 139 ntBASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gm6216-201ENSMUST00000182390 687 ntBASIC6.64□□□□□ -1.35
Ush2AQ2QI47 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gm26670-202ENSMUST00000226862 340 ntBASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gm11663-201ENSMUST00000117888 290 ntBASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gm13315-201ENSMUST00000120376 991 ntBASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gm12164-201ENSMUST00000121695 551 ntBASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gm34379-201ENSMUST00000195036 290 ntBASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ush2AQ2QI47 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms