Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm15595-201ENSMUST00000120840 961 ntBASIC11.51□□□□□ -0.57
Chd8Q09XV5 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm8018-201ENSMUST00000173536 789 ntBASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm45925-201ENSMUST00000218882 744 ntBASIC11.51□□□□□ -0.57
Chd8Q09XV5 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm12470-201ENSMUST00000117239 1049 ntBASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm16071-201ENSMUST00000119589 793 ntBASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.51□□□□□ -0.57
Chd8Q09XV5 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.51□□□□□ -0.57
Chd8Q09XV5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Chd8Q09XV5 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm17826-201ENSMUST00000189720 798 ntBASIC11.51□□□□□ -0.57
Chd8Q09XV5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.51□□□□□ -0.57
Chd8Q09XV5 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.51□□□□□ -0.57
Chd8Q09XV5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Gm11956-201ENSMUST00000119525 512 ntBASIC11.5□□□□□ -0.57
Chd8Q09XV5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Gm23085-201ENSMUST00000157849 293 ntBASIC11.5□□□□□ -0.57
Chd8Q09XV5 Gm2965-201ENSMUST00000198365 343 ntBASIC11.5□□□□□ -0.57
Chd8Q09XV5 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.5□□□□□ -0.57
Chd8Q09XV5 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.5□□□□□ -0.57
Chd8Q09XV5 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.5□□□□□ -0.57
Chd8Q09XV5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.5□□□□□ -0.57
Chd8Q09XV5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.5□□□□□ -0.57
Chd8Q09XV5 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.5□□□□□ -0.57
Chd8Q09XV5 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd8Q09XV5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm25053-201ENSMUST00000103982 133 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm25922-201ENSMUST00000104281 130 ntBASIC11.49□□□□□ -0.57
Chd8Q09XV5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chd8Q09XV5 Gm13916-201ENSMUST00000117368 628 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms