Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smn1P97801 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.13□□□□□ -0.63
Smn1P97801 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smn1P97801 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smn1P97801 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smn1P97801 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smn1P97801 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.12□□□□□ -0.63
Smn1P97801 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.12□□□□□ -0.63
Smn1P97801 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.12□□□□□ -0.63
Smn1P97801 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.12□□□□□ -0.63
Smn1P97801 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.12□□□□□ -0.63
Smn1P97801 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.12□□□□□ -0.63
Smn1P97801 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.12□□□□□ -0.63
Smn1P97801 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.12□□□□□ -0.63
Smn1P97801 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Gm22175-201ENSMUST00000175007 78 ntBASIC11.12□□□□□ -0.63
Smn1P97801 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.12□□□□□ -0.63
Smn1P97801 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.12□□□□□ -0.63
Smn1P97801 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Smn1P97801 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Smn1P97801 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.12□□□□□ -0.63
Smn1P97801 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.12□□□□□ -0.63
Smn1P97801 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smn1P97801 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Smn1P97801 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smn1P97801 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Smn1P97801 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Smn1P97801 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Gm2213-201ENSMUST00000197485 688 ntBASIC11.11□□□□□ -0.63
Smn1P97801 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Smn1P97801 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smn1P97801 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smn1P97801 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.1□□□□□ -0.63
Smn1P97801 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Smn1P97801 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smn1P97801 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smn1P97801 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smn1P97801 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smn1P97801 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.1□□□□□ -0.63
Smn1P97801 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smn1P97801 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Smn1P97801 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smn1P97801 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smn1P97801 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smn1P97801 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smn1P97801 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smn1P97801 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smn1P97801 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms