Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SgcaP82350 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.89□□□□□ -0.67
SgcaP82350 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.89□□□□□ -0.67
SgcaP82350 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.89□□□□□ -0.67
SgcaP82350 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcaP82350 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SgcaP82350 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Gm15467-201ENSMUST00000120582 445 ntBASIC10.88□□□□□ -0.67
SgcaP82350 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SgcaP82350 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SgcaP82350 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SgcaP82350 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.88□□□□□ -0.67
SgcaP82350 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
SgcaP82350 Gm45612-201ENSMUST00000211320 160 ntBASIC10.88□□□□□ -0.67
SgcaP82350 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.88□□□□□ -0.67
SgcaP82350 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.88□□□□□ -0.67
SgcaP82350 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcaP82350 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.87□□□□□ -0.67
SgcaP82350 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.87□□□□□ -0.67
SgcaP82350 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.87□□□□□ -0.67
SgcaP82350 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
SgcaP82350 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
SgcaP82350 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.87□□□□□ -0.67
SgcaP82350 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.87□□□□□ -0.67
SgcaP82350 Gm18766-201ENSMUST00000189811 808 ntBASIC10.87□□□□□ -0.67
SgcaP82350 Gm44771-201ENSMUST00000206975 626 ntBASIC10.87□□□□□ -0.67
SgcaP82350 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
SgcaP82350 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
SgcaP82350 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.87□□□□□ -0.67
SgcaP82350 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.87□□□□□ -0.67
SgcaP82350 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.87□□□□□ -0.67
SgcaP82350 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.87□□□□□ -0.67
SgcaP82350 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
SgcaP82350 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
SgcaP82350 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
SgcaP82350 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SgcaP82350 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SgcaP82350 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms