Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.8□□□□□ -0.36
Shox2P70390 Gm42599-201ENSMUST00000201308 469 ntBASIC12.8□□□□□ -0.36
Shox2P70390 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Shox2P70390 Gm24447-201ENSMUST00000083977 338 ntBASIC12.8□□□□□ -0.36
Shox2P70390 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Shox2P70390 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.79□□□□□ -0.36
Shox2P70390 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.79□□□□□ -0.36
Shox2P70390 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shox2P70390 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Shox2P70390 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Shox2P70390 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Shox2P70390 Gm13884-201ENSMUST00000118103 829 ntBASIC12.79□□□□□ -0.36
Shox2P70390 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Gm9824-201ENSMUST00000178707 561 ntBASIC12.79□□□□□ -0.36
Shox2P70390 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.79□□□□□ -0.36
Shox2P70390 Gm18206-201ENSMUST00000207027 926 ntBASIC12.79□□□□□ -0.36
Shox2P70390 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Shox2P70390 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shox2P70390 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Shox2P70390 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Shox2P70390 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shox2P70390 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Shox2P70390 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.78□□□□□ -0.36
Shox2P70390 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Shox2P70390 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.78□□□□□ -0.36
Shox2P70390 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.78□□□□□ -0.36
Shox2P70390 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.78□□□□□ -0.36
Shox2P70390 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.78□□□□□ -0.36
Shox2P70390 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.78□□□□□ -0.36
Shox2P70390 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.78□□□□□ -0.36
Shox2P70390 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Shox2P70390 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shox2P70390 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Shox2P70390 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shox2P70390 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shox2P70390 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Shox2P70390 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shox2P70390 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shox2P70390 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
Shox2P70390 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms