Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Six5P70178 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Six5P70178 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Six5P70178 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Six5P70178 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Six5P70178 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.15□□□□□ -0.46
Six5P70178 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Six5P70178 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Six5P70178 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.15□□□□□ -0.46
Six5P70178 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.15□□□□□ -0.46
Six5P70178 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Gm27839-201ENSMUST00000184242 106 ntBASIC12.15□□□□□ -0.46
Six5P70178 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.15□□□□□ -0.46
Six5P70178 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.15□□□□□ -0.46
Six5P70178 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.15□□□□□ -0.46
Six5P70178 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.15□□□□□ -0.46
Six5P70178 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Six5P70178 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Six5P70178 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Six5P70178 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.15□□□□□ -0.47
Six5P70178 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Six5P70178 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Six5P70178 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Six5P70178 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.14□□□□□ -0.47
Six5P70178 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Six5P70178 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.14□□□□□ -0.47
Six5P70178 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.14□□□□□ -0.47
Six5P70178 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.14□□□□□ -0.47
Six5P70178 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Six5P70178 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.14□□□□□ -0.47
Six5P70178 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.14□□□□□ -0.47
Six5P70178 Gm4271-201ENSMUST00000174444 973 ntBASIC12.14□□□□□ -0.47
Six5P70178 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.14□□□□□ -0.47
Six5P70178 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.14□□□□□ -0.47
Six5P70178 Gm7561-201ENSMUST00000211203 886 ntBASIC12.14□□□□□ -0.47
Six5P70178 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.14□□□□□ -0.47
Six5P70178 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Six5P70178 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Six5P70178 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Six5P70178 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Six5P70178 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms