Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm24644-201ENSMUST00000157114 139 ntBASIC13.16□□□□□ -0.3
ThraP63058 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.16□□□□□ -0.3
ThraP63058 Gm17420-201ENSMUST00000164753 153 ntBASIC13.16□□□□□ -0.3
ThraP63058 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
ThraP63058 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 Gm42550-201ENSMUST00000201553 960 ntBASIC13.16□□□□□ -0.3
ThraP63058 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.16□□□□□ -0.3
ThraP63058 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.16□□□□□ -0.3
ThraP63058 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 Gm10478-201ENSMUST00000084451 396 ntBASIC13.16□□□□□ -0.3
ThraP63058 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ThraP63058 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.16□□□□□ -0.3
ThraP63058 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ThraP63058 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ThraP63058 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
ThraP63058 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Mir874-201ENSMUST00000104769 76 ntBASIC13.15□□□□□ -0.3
ThraP63058 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ThraP63058 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.15□□□□□ -0.3
ThraP63058 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.15□□□□□ -0.3
ThraP63058 Gm8598-201ENSMUST00000221184 836 ntBASIC13.15□□□□□ -0.3
ThraP63058 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ThraP63058 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ThraP63058 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ThraP63058 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
ThraP63058 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
ThraP63058 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.14□□□□□ -0.31
ThraP63058 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ThraP63058 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ThraP63058 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
ThraP63058 Gm11803-201ENSMUST00000119966 444 ntBASIC13.14□□□□□ -0.31
ThraP63058 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.14□□□□□ -0.31
ThraP63058 Gm42693-201ENSMUST00000196779 631 ntBASIC13.14□□□□□ -0.31
ThraP63058 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.14□□□□□ -0.31
ThraP63058 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.14□□□□□ -0.31
ThraP63058 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.14□□□□□ -0.31
ThraP63058 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
ThraP63058 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.14□□□□□ -0.31
ThraP63058 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ThraP63058 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.14□□□□□ -0.31
ThraP63058 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ThraP63058 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
ThraP63058 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ThraP63058 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ThraP63058 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ThraP63058 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ThraP63058 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ThraP63058 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.13□□□□□ -0.31
ThraP63058 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ThraP63058 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ThraP63058 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.13□□□□□ -0.31
ThraP63058 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ThraP63058 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ThraP63058 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.13□□□□□ -0.31
ThraP63058 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ThraP63058 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ThraP63058 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ThraP63058 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ThraP63058 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ThraP63058 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ThraP63058 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ThraP63058 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.13□□□□□ -0.31
ThraP63058 Gm6152-201ENSMUST00000151704 340 ntBASIC13.13□□□□□ -0.31
ThraP63058 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms